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ORMIR Workshop on Building the Jupyter Community in Musculoskeletal Imaging Research


In June 2022, members of SPECTRA met in Maastricht to join the Open and Reproducible Musculoskeletal Imaging Research (ORMIR) community for a 3-day event involving workshops, tutorials, and hackathons. SPECTRA worked on converting algorithms for automatic segmentation of the periosteal and endosteal surfaces and 3D joint space width into modules using python and simple ITK libraries for Jupyter notebooks. We aim to share and implement among research groups in the next 12 -months. Preliminary outputs of the workshop are available here: https://github.com/SpectraCollab/ORMIR_2022 Stay tuned for future updates! We are also planning to meet again in 2023 - stay tuned or reach out for more details.

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